Genomes, Browsers and Databases
Data-mining Tools for Integrated Genomic Databases
By (author) Peter Schattner
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Genomes, Browsers and Databases by Peter Schattner
Book DescriptionThe recent explosive growth of biological data has lead to a rapid increase in the number of molecular biology databases. Held in many different locations and often using varying interfaces and non-standard data formats, integrating and comparing data from these multiple databases can be difficult and time-consuming. This book provides an overview of the key tools currently available for large-scale comparisons of gene sequences and annotations, focusing on the databases and tools from the University of California, Santa Cruz (UCSC), Ensembl, and the National Centre for Biotechnology Information (NCBI). Written specifically for biology and bioinformatics students and researchers, it aims to give an appreciation of the methods by which the browsers and their databases are constructed, enabling readers to determine which tool is the most appropriate for their requirements. Each chapter contains a summary and exercises to aid understanding and promote effective use of these important tools.
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Book DetailsISBN: 9780521884433
(253mm x 177mm x 22mm)
Imprint: Cambridge University Press
Publisher: Cambridge University Press
Publish Date: 16-Jun-2008
Country of Publication: United Kingdom
Books By Author Peter Schattner
Genomes, Browsers and Databases, Paperback (June 2008)
Guide to key tools for large-scale gene-sequence and annotation comparisons for bioinformatics students and researchers.
Computing and Information Management in General Practice, Paperback (July 2007)» View all books by Peter Schattner
General practitioners have complex requirements involving access to online administration, e-health, patient records and privacy. Covering the fundamentals of computing practice and information management, this book helps educate the primary care market to their digital responsibilities for effective patient, practice and information management.
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Author Biography - Peter Schattner
Originally trained as a theoretical physicist, Peter Schattner is currently a computational biologist at the University of California, Santa Cruz (UCSC). His principal research interests are in the genome-wide identification and characterization of non-protein-coding RNA genes and cis-regulatory mRNA motifs. Dr. Schattner has taught bioinformatics courses at the University of California and California State University and has worked in the research and development of medical ultrasound and magnetic resonance instrumentation at SRI (Stanford Research Institute) and Diasonics, Inc. He has been a Woodrow Wilson Fellow and was leader of the team that received the 1990 Matzuk Award for technical innovation from the American Institute of Ultrasound in Medicine.
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